Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | HF324_30355 | Not Available | + | 1398515 - 1399891 | 53503.0 |
| dna repair protein recn | HF324_30360 | P44496 | + | 1399931 - 1401577 | 61440.7 |
| sdr family oxidoreductase | HF324_30365 | P58381 | + | 1401694 - 1402509 | 29604.6 |
| duf2795 domain-containing protein | HF324_30370 | Not Available | - | 1402671 - 1402892 | 8647.67 |
| abc transporter atp-binding protein | HF324_30375 | Q11SW8 | + | 1402993 - 1403643 | 23740.7 |
| histone deacetylase | HF324_30380 | P28606 | - | 1403907 - 1404809 | 33431.1 |
| ligase-associated dna damage response endonuclease pdem | HF324_30385 | Q60344 | - | 1404903 - 1405568 | 25526.8 |
| ligase-associated dna damage response dexh box helicase | HF324_30390 | Q57742 | - | 1405588 - 1408038 | 92523.6 |
| ncs2 family permease | HF324_30395 | Q57772 | + | 1408090 - 1409412 | 46486.0 |
| ld-carboxypeptidase | HF324_30400 | O34851 | - | 1409413 - 1410444 | 38219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.