Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | HF324_29900 | A6H198 | - | 1277710 - 1278969 | 46933.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | HF324_29905 | Q11RG9 | - | 1279061 - 1280527 | 53228.0 |
| transpeptidase family protein | HF324_29910 | G3XD46 | - | 1280528 - 1282633 | 77954.6 |
| hypothetical protein | HF324_29915 | Not Available | - | 1282845 - 1283135 | 11202.0 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | HF324_29920 | Q8A251 | - | 1283331 - 1284242 | 34177.1 |
| division/cell wall cluster transcriptional repressor mraz | HF324_29925 | A0M535 | - | 1284254 - 1284721 | 17491.9 |
| outer membrane protein assembly factor bamd | HF324_29930 | Q9A6U9 | + | 1285233 - 1286066 | 32792.8 |
| dna-directed rna polymerase subunit omega | HF324_29935 | Not Available | + | 1286035 - 1286376 | 13202.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | HF324_29940 | A0A2I9 | + | 1286487 - 1287695 | 43326.6 |
| duf4835 family protein | HF324_29945 | Not Available | + | 1287688 - 1288614 | 35381.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.