Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconate transporter | HF324_29750 | P39835 | + | 1237367 - 1238680 | 46654.8 |
| rida family protein | HF324_29755 | O96876 | + | 1238700 - 1239161 | 16298.8 |
| d-ta family plp-dependent enzyme | HF324_29760 | O82872 | + | 1239173 - 1240273 | 40500.2 |
| family 20 glycosylhydrolase | HF324_29765 | B2UPR7 | - | 1240343 - 1242394 | 76409.3 |
| ragb/susd family nutrient uptake outer membrane protein | HF324_29770 | T2KNB8 | - | 1242771 - 1244375 | 60595.8 |
| tonb-dependent receptor | HF324_29775 | T2KPJ3 | - | 1244408 - 1247689 | 120438.0 |
| fecr family protein | HF324_29780 | Not Available | - | 1247911 - 1248882 | 36321.0 |
| sigma-70 family rna polymerase sigma factor | HF324_29785 | P23484 | - | 1248937 - 1249503 | 22013.3 |
| hypothetical protein | HF324_29790 | Not Available | - | 1249564 - 1249956 | 14364.7 |
| hypothetical protein | HF324_29795 | Not Available | - | 1250021 - 1250773 | 28091.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.