Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sinipercae |
| Strain | HDW15C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sinipercae HDW15C
Accession NumberCP049871.1
Gene Summary
Adenine Count
357137 bp
Thymine Count
358310 bp
Guanine Count
677856 bp
Cytosine Count
677703 bp
Genome Length
2071006 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | G7078_04805 | A5VCF0 | - | 931495 - 932622 | 39538.1 |
| cupin domain-containing protein | G7078_04810 | Not Available | + | 932658 - 933104 | 16197.8 |
| glutathione s-transferase family protein | G7078_04815 | P77544 | - | 933101 - 933769 | 25282.1 |
| yiha family ribosome biogenesis gtp-binding protein | G7078_04820 | Q1GN74 | - | 933779 - 934420 | 23334.0 |
| membrane protein insertase yidc | G7078_04825 | Q9RNL5 | - | 934422 - 936131 | 62532.2 |
| membrane protein insertion efficiency factor yidd | G7078_04830 | Q1GN72 | - | 936154 - 936366 | 7731.51 |
| ribonuclease p protein component | G7078_04835 | Q2N7X0 | - | 936363 - 936683 | 11825.5 |
| 50s ribosomal protein l34 | G7078_04840 | A3PNA6 | - | 936695 - 936829 | 5093.33 |
| hypothetical protein | G7078_04845 | Not Available | - | 936926 - 937087 | 6597.92 |
| hypothetical protein | G7078_04850 | Not Available | - | 937102 - 937257 | 5595.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.