Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sinipercae |
| Strain | HDW15C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sinipercae HDW15C
Accession NumberCP049871.1
Gene Summary
Adenine Count
357137 bp
Thymine Count
358310 bp
Guanine Count
677856 bp
Cytosine Count
677703 bp
Genome Length
2071006 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | G7078_03805 | A0A0H2VBH0 | + | 753276 - 755141 | 67172.2 |
| dead/deah box helicase | G7078_03810 | P44586 | - | 755138 - 756811 | 61602.0 |
| polyribonucleotide nucleotidyltransferase | G7078_03815 | A5VCY9 | - | 757047 - 759425 | 84566.1 |
| 30s ribosomal protein s15 | G7078_03820 | Q1GVQ9 | - | 759585 - 759854 | 10372.6 |
| trna pseudouridine(55) synthase trub | G7078_03825 | Q2G5F3 | - | 759872 - 760807 | 32773.4 |
| thymidine kinase | G7078_03830 | Q2G5F0 | - | 760807 - 761427 | 22951.5 |
| hypothetical protein | G7078_03835 | Not Available | - | 761518 - 761913 | 13676.8 |
| gnat family n-acetyltransferase | G7078_03840 | P40586 | - | 761910 - 762443 | 20151.0 |
| 30s ribosome-binding factor rbfa | G7078_03845 | A5VCZ4 | - | 762440 - 762832 | 14952.9 |
| translation initiation factor if-2 | G7078_03850 | Q1GVI9 | - | 762925 - 765432 | 90316.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.