Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sinipercae |
| Strain | HDW15C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sinipercae HDW15C
Accession NumberCP049871.1
Gene Summary
Adenine Count
357137 bp
Thymine Count
358310 bp
Guanine Count
677856 bp
Cytosine Count
677703 bp
Genome Length
2071006 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase liga | G7078_02705 | Q1GVQ2 | - | 517437 - 519473 | 73667.7 |
| dienelactone hydrolase family protein | G7078_02710 | Q09571 | - | 519466 - 520188 | 25570.5 |
| dna repair protein recn | G7078_02715 | Q9PB02 | - | 520185 - 521837 | 57798.5 |
| outer membrane protein assembly factor bamd | G7078_02720 | Q9A6U9 | - | 521851 - 522642 | 30003.6 |
| protein translocase subunit secf | G7078_02725 | O33518 | - | 522723 - 523673 | 34460.4 |
| protein translocase subunit secd | G7078_02730 | C7JGJ8 | - | 523686 - 525272 | 56538.1 |
| preprotein translocase subunit yajc | G7078_02735 | Q2YNM1 | - | 525287 - 525550 | 9606.87 |
| Trna-pro | Not Available | Not Available | + | 525654 - 525730 | Not Available |
| tigr02117 family protein | G7078_02745 | Not Available | + | 525837 - 526505 | 25129.2 |
| atp-dependent protease atpase subunit hslu | G7078_02750 | B8IMW6 | - | 526493 - 527788 | 47215.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.