Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sinipercae |
| Strain | HDW15C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sinipercae HDW15C
Accession NumberCP049871.1
Gene Summary
Adenine Count
357137 bp
Thymine Count
358310 bp
Guanine Count
677856 bp
Cytosine Count
677703 bp
Genome Length
2071006 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | G7078_08605 | Not Available | - | 1647245 - 1647694 | 16225.6 |
| m48 family metalloprotease | G7078_08610 | Q8XAD2 | - | 1647691 - 1648710 | 36194.6 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | G7078_08615 | A5V3X0 | - | 1648800 - 1649741 | 33725.6 |
| tyrosine recombinase | G7078_08620 | Q2NB52 | - | 1649776 - 1650663 | 32479.1 |
| hypothetical protein | G7078_08625 | Not Available | - | 1650660 - 1652447 | 62297.5 |
| shikimate kinase | G7078_08630 | Q2G733 | + | 1652641 - 1653189 | 20273.4 |
| sodium:proton exchanger | G7078_08635 | P44933 | - | 1653149 - 1654915 | 63652.4 |
| iron-sulfur cluster assembly scaffold protein | G7078_08640 | Not Available | - | 1655005 - 1655424 | 14250.1 |
| cysteine--trna ligase | G7078_08645 | B0T101 | - | 1655421 - 1656731 | 47624.5 |
| cvpa family protein | G7078_08650 | P08550 | - | 1656728 - 1657237 | 17885.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.