Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sinipercae |
| Strain | HDW15C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sinipercae HDW15C
Accession NumberCP049871.1
Gene Summary
Adenine Count
357137 bp
Thymine Count
358310 bp
Guanine Count
677856 bp
Cytosine Count
677703 bp
Genome Length
2071006 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | G7078_06755 | Q1GRR1 | - | 1290205 - 1290435 | 8414.89 |
| hypothetical protein | G7078_06760 | Not Available | - | 1290533 - 1291069 | 18732.4 |
| tonb-dependent receptor | G7078_06765 | Q1CBU1 | + | 1291400 - 1293256 | 67021.9 |
| 3-hydroxyacyl-acp dehydratase fabz | G7078_06770 | A5V3H2 | - | 1293259 - 1293732 | 16796.7 |
| omph family outer membrane protein | G7078_06775 | Not Available | - | 1293736 - 1294326 | 21050.9 |
| outer membrane protein assembly factor bama | G7078_06780 | Q9K1H0 | - | 1294326 - 1296959 | 96524.3 |
| rip metalloprotease | G7078_06785 | Q8UFL7 | - | 1297079 - 1298194 | 39122.0 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | G7078_06790 | Q9X5F2 | - | 1298194 - 1299354 | 40415.9 |
| phosphatidate cytidylyltransferase | G7078_06795 | Q8YHH2 | - | 1299351 - 1299983 | 22381.6 |
| di-trans,poly-cis-decaprenylcistransferase | G7078_06800 | Q9X5F1 | - | 1299980 - 1300741 | 27394.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.