Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sinipercae |
| Strain | HDW15C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sinipercae HDW15C
Accession NumberCP049871.1
Gene Summary
Adenine Count
357137 bp
Thymine Count
358310 bp
Guanine Count
677856 bp
Cytosine Count
677703 bp
Genome Length
2071006 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | G7078_06605 | Not Available | + | 1257384 - 1257605 | 7331.69 |
| carbonic anhydrase | G7078_06610 | P46511 | - | 1257614 - 1258252 | 23710.0 |
| lipoyl synthase | G7078_06615 | Q1GTM7 | + | 1258317 - 1259252 | 34237.1 |
| type ii toxin-antitoxin system rata family toxin | G7078_06620 | Q9ZDZ7 | + | 1259252 - 1259713 | 17736.0 |
| cina family protein | G7078_06625 | P51967 | - | 1259674 - 1260177 | 17030.3 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | G7078_06630 | A5V2U9 | - | 1260174 - 1261319 | 39506.3 |
| trna dihydrouridine synthase dusb | G7078_06635 | P45672 | + | 1261370 - 1262368 | 36050.0 |
| hamp domain-containing protein | G7078_06640 | Q04850 | + | 1262430 - 1264694 | 83110.5 |
| sigma-54-dependent fis family transcriptional regulator | G7078_06645 | Q04849 | + | 1264708 - 1266087 | 51193.4 |
| rna chaperone hfq | G7078_06650 | B6JDZ0 | + | 1266105 - 1266599 | 17950.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.