Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sinipercae |
| Strain | HDW15C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sinipercae HDW15C
Accession NumberCP049871.1
Gene Summary
Adenine Count
357137 bp
Thymine Count
358310 bp
Guanine Count
677856 bp
Cytosine Count
677703 bp
Genome Length
2071006 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rsmb/nop family class i sam-dependent rna methyltransferase | G7078_05255 | Q5PIT6 | + | 1009547 - 1010722 | 41844.1 |
| tetratricopeptide repeat protein | G7078_05260 | Not Available | + | 1010745 - 1011239 | 17449.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | G7078_05265 | Q2N8W9 | - | 1011236 - 1012081 | 30104.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | G7078_05270 | Q5NMX3 | - | 1012051 - 1013055 | 34984.0 |
| peptidylprolyl isomerase | G7078_05275 | Q88QT4 | - | 1013067 - 1014440 | 49210.9 |
| lps-assembly protein lptd | G7078_05280 | Q3JAF0 | - | 1014511 - 1016727 | 81350.3 |
| leucyl aminopeptidase | G7078_05285 | Q9A7M9 | + | 1016869 - 1018335 | 50883.6 |
| dna polymerase iii subunit chi | G7078_05290 | P43749 | + | 1018345 - 1018779 | 15799.8 |
| nucleoside-diphosphate kinase | G7078_05295 | A5V287 | + | 1018853 - 1019275 | 15598.4 |
| phosphoribosylglycinamide formyltransferase | G7078_05300 | P22102 | - | 1019312 - 1019905 | 21335.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.