Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas piscis |
| Strain | HDW15B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas piscis HDW15B
Accession NumberCP049869.1
Gene Summary
Adenine Count
500249 bp
Thymine Count
497942 bp
Guanine Count
856571 bp
Cytosine Count
863273 bp
Genome Length
2718035 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| family 1 glycosylhydrolase | G7077_07615 | P12614 | - | 1523201 - 1524472 | 49355.2 |
| 4-hydroxyphenylpyruvate dioxygenase | G7077_07620 | O06695 | - | 1524594 - 1525682 | 40851.3 |
| rna polymerase factor sigma-54 | G7077_07625 | P30332 | - | 1525846 - 1527309 | 52375.9 |
| lps export abc transporter atp-binding protein | G7077_07630 | P33982 | - | 1527319 - 1528041 | 26519.2 |
| osta family protein | G7077_07635 | P25893 | - | 1528103 - 1528627 | 17983.4 |
| lps export abc transporter periplasmic protein lptc | G7077_07640 | Not Available | - | 1528633 - 1529271 | 23308.2 |
| ribonuclease d | G7077_07645 | A9H9B7 | - | 1529277 - 1529900 | 23472.9 |
| cold-shock protein | G7077_07650 | P55390 | + | 1530117 - 1530950 | 27405.8 |
| endopeptidase la | G7077_07655 | Not Available | + | 1531034 - 1531572 | 19343.0 |
| cisplatin damage response atp-dependent dna ligase | G7077_07660 | Q1II25 | - | 1531547 - 1533157 | 60235.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.