Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yfir family protein | GV829_13955 | P64549 | + | 2919312 - 2919818 | 18078.9 |
| diguanylate cyclase | GV829_13960 | P46139 | + | 2919815 - 2921089 | 45869.1 |
| ompa family protein | GV829_13965 | P07021 | + | 2921086 - 2921574 | 17194.4 |
| crp/fnr family transcriptional regulator | GV829_13970 | P9WMH2 | - | 2921587 - 2922234 | 23702.6 |
| nad-dependent dna ligase liga | GV829_13975 | Q1GVQ2 | - | 2922541 - 2924595 | 73484.2 |
| dna repair protein recn | GV829_13980 | Q87BS5 | - | 2924595 - 2926259 | 58584.4 |
| outer membrane protein assembly factor bamd | GV829_13985 | Q9A6U9 | - | 2926347 - 2927138 | 30055.4 |
| 4-hydroxybenzoate octaprenyltransferase | GV829_13990 | Q298G6 | - | 2927226 - 2928140 | 33238.9 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | GV829_13995 | Q92J59 | + | 2928239 - 2928985 | 26734.7 |
| hypothetical protein | GV829_14000 | Not Available | - | 2928992 - 2930812 | 61623.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.