Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | GV829_05010 | Not Available | - | 1066301 - 1066840 | 19561.1 |
| yggs family pyridoxal phosphate-dependent enzyme | GV829_05015 | O66631 | + | 1066924 - 1067619 | 24690.9 |
| tonb-dependent receptor | GV829_05020 | A5F661 | - | 1067714 - 1070458 | 97421.4 |
| ligase-associated dna damage response endonuclease pdem | GV829_05025 | Not Available | - | 1070631 - 1071332 | 25683.0 |
| hypothetical protein | GV829_05030 | Q6CFI3 | - | 1071393 - 1072433 | 37167.9 |
| dipeptidase | GV829_05035 | M1VV65 | - | 1072565 - 1073791 | 44335.5 |
| ligase-associated dna damage response dexh box helicase | GV829_05040 | Q57742 | - | 1073833 - 1076295 | 90142.8 |
| ligase-associated dna damage response exonuclease | GV829_05045 | B1ZZL9 | + | 1076305 - 1077342 | 37819.2 |
| peptidylprolyl isomerase | GV829_05050 | P0AFL5 | - | 1077346 - 1077990 | 22200.8 |
| rna polymerase factor sigma-54 | GV829_05055 | P33984 | - | 1078083 - 1079603 | 54135.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.