Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | GV829_04210 | Q30V54 | + | 910987 - 912549 | 57404.5 |
| tonb-dependent receptor | GV829_04215 | P46359 | - | 912669 - 914957 | 81352.6 |
| tetr/acrr family transcriptional regulator | GV829_04220 | P96701 | + | 915204 - 915809 | 21656.7 |
| quinolinate synthase nada | GV829_04225 | Q8DM90 | - | 916662 - 917654 | 36318.8 |
| duf4230 domain-containing protein | GV829_04230 | Not Available | - | 917658 - 918260 | 22120.9 |
| mbl fold metallo-hydrolase | GV829_04235 | Q561R9 | - | 918305 - 919243 | 32784.7 |
| grx4 family monothiol glutaredoxin | GV829_04240 | P73056 | - | 919620 - 919937 | 11778.0 |
| bola family transcriptional regulator | GV829_04245 | P73055 | - | 919971 - 920204 | 8117.72 |
| duf1476 domain-containing protein | GV829_04250 | Not Available | - | 920208 - 920531 | 11848.8 |
| cysteine--trna ligase | GV829_04255 | Q2G5Q6 | + | 920708 - 922186 | 55095.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.