Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | GV829_04160 | Q0C5A1 | + | 902285 - 903220 | 33087.8 |
| histidinol-phosphatase | GV829_04165 | Q6NPM8 | + | 903335 - 904117 | 27851.0 |
| arac family transcriptional regulator | GV829_04170 | P43458 | + | 904105 - 905019 | 33996.6 |
| helix-turn-helix transcriptional regulator | GV829_04175 | Not Available | + | 905016 - 905912 | 33695.3 |
| 50s ribosomal protein l35 | GV829_04180 | Q1GNX7 | + | 906062 - 906265 | 7504.22 |
| 50s ribosomal protein l20 | GV829_04185 | Q1GNX8 | + | 906280 - 906645 | 13616.7 |
| phenylalanine--trna ligase subunit alpha | GV829_04190 | A5V922 | + | 906753 - 907847 | 39709.2 |
| phenylalanine--trna ligase subunit beta | GV829_04195 | Q2GAI7 | + | 907844 - 910222 | 83302.2 |
| hypothetical protein | GV829_04200 | Not Available | + | 910227 - 910508 | 10278.2 |
| hypothetical protein | GV829_04205 | Not Available | + | 910513 - 910899 | 13716.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.