Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | GV829_04010 | Q1GP42 | - | 869044 - 870078 | 35157.4 |
| hydroxymethylbilane synthase | GV829_04015 | Q1GP41 | + | 870160 - 871089 | 32613.4 |
| uroporphyrinogen-iii synthase | GV829_04020 | Not Available | + | 871097 - 871774 | 23330.5 |
| hypothetical protein | GV829_04025 | C1GYK6 | + | 871846 - 872733 | 31478.1 |
| [protein-pii] uridylyltransferase | GV829_04030 | Q2GAJ4 | - | 872782 - 875544 | 103012.0 |
| dna mismatch repair protein muts | GV829_04035 | A5VA00 | - | 875554 - 878151 | 91395.2 |
| nadp-dependent malic enzyme | GV829_04040 | O30808 | + | 878371 - 880635 | 81505.3 |
| outer membrane protein assembly factor bame | GV829_04045 | Not Available | - | 880712 - 881230 | 18057.4 |
| ubiquinol-cytochrome c chaperone | GV829_04050 | Not Available | + | 881416 - 881940 | 18656.5 |
| duf177 domain-containing protein | GV829_04055 | Not Available | + | 881944 - 882540 | 21257.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.