Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | GV829_10155 | Q93VR3 | + | 2108152 - 2109126 | 36389.8 |
| nad-dependent epimerase/dehydratase family protein | GV829_10160 | O49213 | + | 2109215 - 2110123 | 31603.9 |
| sdr family nad(p)-dependent oxidoreductase | GV829_10165 | O06485 | + | 2110247 - 2111257 | 37290.8 |
| calcium-binding protein | GV829_10170 | Q06953 | + | 2111289 - 2112456 | 41197.8 |
| acylneuraminate cytidylyltransferase family protein | GV829_10175 | Q5ZXI0 | + | 2112460 - 2113170 | 25875.2 |
| neud/pglb/viob family sugar acetyltransferase | GV829_10180 | Q0P9D1 | + | 2113170 - 2113808 | 22120.7 |
| n-acetylneuraminate synthase | GV829_10185 | Q0P8T1 | + | 2113805 - 2114809 | 35858.9 |
| udp-n-acetylglucosamine 2-epimerase (hydrolyzing) | GV829_10190 | Q0P8T0 | + | 2114806 - 2115975 | 42086.6 |
| ntp transferase domain-containing protein | GV829_10195 | Q6CCU3 | + | 2116010 - 2117056 | 38684.9 |
| n-acetyl sugar amidotransferase | GV829_10200 | Not Available | + | 2117099 - 2118418 | 50861.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.