Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | GV829_09755 | Not Available | + | 2039338 - 2040477 | 41885.5 |
| s9 family peptidase | GV829_09760 | V5YMB3 | - | 2040480 - 2042381 | 69113.7 |
| m28 family peptidase | GV829_09765 | P80561 | + | 2042648 - 2044309 | 59834.6 |
| agmatine deiminase family protein | GV829_09770 | A4VFL7 | + | 2044370 - 2045404 | 36436.1 |
| duf3147 family protein | GV829_09775 | Not Available | + | 2045406 - 2045759 | 12961.6 |
| class i sam-dependent methyltransferase | GV829_09780 | Q562C4 | + | 2045787 - 2046407 | 22828.5 |
| hypothetical protein | GV829_09785 | Not Available | - | 2046416 - 2046769 | 12799.1 |
| rhodanese-related sulfurtransferase | GV829_09790 | Q5FSH9 | - | 2047129 - 2048022 | 32845.1 |
| 30s ribosomal protein s4 | GV829_09795 | Q1GV16 | - | 2048149 - 2048760 | 23044.8 |
| chorismate mutase | GV829_09800 | Q51507 | + | 2048962 - 2049276 | 11531.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.