Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | GV829_09655 | Q2G8P1 | + | 2015272 - 2017056 | 65370.8 |
| alpha/beta fold hydrolase | GV829_09660 | L0TC47 | + | 2017059 - 2017955 | 32981.0 |
| polyphosphate kinase | GV829_09665 | Q886D9 | + | 2018044 - 2018862 | 30900.3 |
| tetratricopeptide repeat protein | GV829_09670 | Not Available | + | 2019011 - 2019388 | 13303.9 |
| nitroreductase | GV829_09675 | Q6DLR9 | - | 2019446 - 2020123 | 24969.8 |
| transcription elongation factor greb | GV829_09680 | Q9K0C5 | - | 2020226 - 2020729 | 18288.7 |
| transglycosylase slt domain-containing protein | GV829_09685 | P0AGC4 | - | 2020729 - 2022765 | 73437.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | GV829_09690 | Q1GSC8 | + | 2022886 - 2023767 | 30964.9 |
| ssra-binding protein smpb | GV829_09695 | Q1GSC9 | + | 2023767 - 2024249 | 18415.0 |
| duf2062 domain-containing protein | GV829_09700 | Not Available | + | 2024263 - 2024850 | 21743.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.