Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | GV829_09405 | P45754 | + | 1960039 - 1961256 | 43782.2 |
| duf3473 domain-containing protein | GV829_09410 | B5ZA76 | + | 1961269 - 1962165 | 33415.7 |
| gnat family n-acetyltransferase | GV829_09415 | Not Available | + | 1962198 - 1963334 | 42054.2 |
| tigr03087 family pep-cterm/xrta system glycosyltransferase | GV829_09420 | A0QWG6 | + | 1963350 - 1964558 | 43546.5 |
| exosortase a | GV829_09425 | Not Available | + | 1964555 - 1966063 | 54979.9 |
| amidotransferase 1, exosortase a system-associated | GV829_09430 | P64248 | + | 1966082 - 1967977 | 69649.0 |
| trna pseudouridine(38-40) synthase trua | GV829_09435 | Q1GWK1 | - | 1967974 - 1968711 | 27428.7 |
| methionyl-trna formyltransferase | GV829_09440 | Q1GWK0 | - | 1968711 - 1969631 | 31989.7 |
| recombination protein recr | GV829_09445 | Q1GWJ9 | + | 1969721 - 1970317 | 21226.8 |
| hypothetical protein | GV829_09450 | Not Available | + | 1970329 - 1971030 | 26258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.