Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dsd1 family plp-dependent enzyme | GV829_09155 | O82872 | + | 1904954 - 1906204 | 45044.5 |
| glycoside hydrolase family 3 protein | GV829_09160 | Q23892 | - | 1906220 - 1908562 | 82053.0 |
| sugar mfs transporter | GV829_09165 | Q2YIJ8 | - | 1908739 - 1910031 | 44333.2 |
| glycoside hydrolase family 16 protein | GV829_09170 | P45798 | - | 1910034 - 1910954 | 34753.7 |
| tonb-dependent receptor | GV829_09175 | Q9Z3Q5 | - | 1911149 - 1914352 | 113876.0 |
| tryptophan 7-halogenase | GV829_09180 | P95480 | + | 1914510 - 1916015 | 55802.5 |
| laci family dna-binding transcriptional regulator | GV829_09185 | O87590 | + | 1916180 - 1917235 | 36992.1 |
| mfs transporter | GV829_09190 | Not Available | + | 1917232 - 1918452 | 42511.1 |
| calcium-binding protein | GV829_09195 | P50358 | + | 1918513 - 1919270 | 26769.9 |
| hypothetical protein | GV829_09200 | Not Available | - | 1919331 - 1919579 | 9776.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.