Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | GV829_08805 | P26837 | + | 1816358 - 1816858 | 18311.7 |
| is6 family transposase | GV829_08810 | P0C1L0 | + | 1816963 - 1817670 | 28319.2 |
| type ii toxin-antitoxin system mqsr family toxin | GV829_08815 | Q46865 | + | 1817806 - 1818123 | 11835.1 |
| type ii toxin-antitoxin system mqsa family antitoxin | GV829_08820 | Q46864 | + | 1818116 - 1818538 | 15605.7 |
| paai family thioesterase | GV829_08825 | Q9I644 | - | 1818983 - 1819408 | 15464.7 |
| alpha/beta hydrolase | GV829_08830 | B6EPQ0 | - | 1819405 - 1820313 | 33570.1 |
| lysr family transcriptional regulator | GV829_08835 | A0A0H2ZDG9 | + | 1820491 - 1821363 | 31337.0 |
| helix-turn-helix domain-containing protein | GV829_08840 | Q9KMA5 | + | 1821842 - 1822279 | 15757.3 |
| tonb-dependent receptor | GV829_08845 | P76115 | - | 1822365 - 1824815 | 87026.4 |
| tonb-dependent receptor | GV829_08850 | Q8X714 | - | 1824821 - 1826863 | 72997.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.