Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | GV829_08605 | Q1GTD8 | + | 1779978 - 1781339 | 47525.4 |
| duf3291 domain-containing protein | GV829_08610 | Not Available | + | 1781345 - 1781806 | 17018.2 |
| gnat family n-acetyltransferase | GV829_08615 | P05332 | + | 1781817 - 1782359 | 19938.8 |
| glutathione s-transferase family protein | GV829_08620 | Q9RBP4 | - | 1782347 - 1783054 | 25773.2 |
| copg family transcriptional regulator | GV829_08625 | P0AFU6 | + | 1783173 - 1783421 | 9537.2 |
| type ii toxin-antitoxin system vapc family toxin | GV829_08630 | Not Available | + | 1783443 - 1783808 | 13784.8 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | GV829_08635 | Q5NRH4 | + | 1783830 - 1785653 | 64864.3 |
| hypothetical protein | GV829_08640 | Not Available | + | 1785680 - 1786180 | 17993.0 |
| hypothetical protein | GV829_08645 | Not Available | + | 1786198 - 1786476 | 10384.5 |
| m50 family metallopeptidase | GV829_08650 | Not Available | + | 1786473 - 1787192 | 26108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.