Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose/gdp-mannose dehydrogenase family protein | GV829_08405 | O54068 | + | 1743920 - 1745233 | 46556.9 |
| superoxide dismutase family protein | GV829_08410 | O31851 | + | 1745331 - 1745849 | 17104.4 |
| mfs transporter | GV829_08415 | A0QYL8 | - | 1745910 - 1747466 | 54351.4 |
| low molecular weight phosphotyrosine protein phosphatase | GV829_08420 | P41893 | + | 1747601 - 1748104 | 18030.2 |
| rna 2',3'-cyclic phosphodiesterase | GV829_08425 | Q45633 | - | 1748117 - 1748653 | 19260.2 |
| bax inhibitor-1/ycca family protein | GV829_08430 | Q9A2A3 | + | 1748820 - 1749557 | 26222.4 |
| hypothetical protein | GV829_08435 | Not Available | - | 1749669 - 1749857 | 6566.2 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | GV829_08440 | Q1GVV2 | - | 1749902 - 1751185 | 44759.5 |
| 2-hydroxychromene-2-carboxylate isomerase | GV829_08445 | Q52462 | - | 1751251 - 1751856 | 22038.9 |
| sdr family oxidoreductase | GV829_08450 | B0ZT44 | - | 1751850 - 1752575 | 25775.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.