Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | GV829_08305 | Not Available | - | 1727987 - 1729069 | 39701.4 |
| Trna-leu | Not Available | Not Available | + | 1729260 - 1729343 | Not Available |
| integration host factor subunit beta | GV829_08315 | Q28LB0 | - | 1729487 - 1729768 | 10372.3 |
| 30s ribosomal protein s1 | GV829_08320 | P14129 | - | 1730030 - 1731751 | 62179.0 |
| hypothetical protein | GV829_08325 | Not Available | - | 1732092 - 1732250 | 5716.94 |
| (d)cmp kinase | GV829_08330 | Q2J2F8 | - | 1732363 - 1732992 | 21641.6 |
| hypothetical protein | GV829_08335 | Not Available | - | 1732989 - 1733255 | 9319.54 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | GV829_08340 | Q1GT16 | - | 1733264 - 1734673 | 48043.0 |
| tigr02300 family protein | GV829_08345 | Not Available | + | 1734797 - 1735123 | 11775.5 |
| Trna-ala | Not Available | Not Available | + | 1735232 - 1735307 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.