Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster assembly scaffold protein | GV829_08155 | Not Available | + | 1695743 - 1696183 | 15294.2 |
| sodium:proton exchanger | GV829_08160 | B5FI29 | + | 1696180 - 1697973 | 63622.9 |
| duf423 domain-containing protein | GV829_08165 | P45019 | + | 1697963 - 1698319 | 12117.0 |
| duf2256 domain-containing protein | GV829_08170 | Not Available | - | 1698607 - 1698750 | 5670.94 |
| 3-dehydroquinate synthase | GV829_08175 | Q5NPY8 | - | 1698753 - 1699865 | 38512.0 |
| shikimate kinase | GV829_08180 | Q6NCG8 | - | 1699862 - 1700428 | 20717.2 |
| hypothetical protein | GV829_08185 | Not Available | + | 1700579 - 1702444 | 65023.5 |
| tyrosine recombinase | GV829_08190 | Q2NB52 | + | 1702447 - 1703418 | 35713.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | GV829_08195 | Q1GS64 | + | 1703454 - 1704401 | 33878.6 |
| m48 family metalloprotease | GV829_08200 | Q9P7G4 | + | 1704504 - 1706027 | 53574.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.