Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | GV829_08105 | Q1GWI7 | - | 1688446 - 1688817 | 14456.7 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | GV829_08110 | Q2NAK3 | - | 1688819 - 1689661 | 28837.0 |
| penicillin-binding protein activator | GV829_08115 | Q9ZCJ2 | + | 1689672 - 1690850 | 40971.8 |
| type ii toxin-antitoxin system rele/pare family toxin | GV829_08120 | O33348 | - | 1690935 - 1691207 | 10572.8 |
| tray domain-containing protein | GV829_08125 | Not Available | - | 1691191 - 1691418 | 8161.69 |
| fructose-6-phosphate aldolase | GV829_08130 | Q1GS53 | - | 1691471 - 1692124 | 23068.0 |
| duf2490 domain-containing protein | GV829_08135 | Q49116 | + | 1692290 - 1692916 | 22509.4 |
| duf4197 domain-containing protein | GV829_08140 | Not Available | - | 1692999 - 1693700 | 24274.4 |
| dna repair protein rada | GV829_08145 | Q2YMH5 | + | 1693806 - 1695173 | 47492.1 |
| cvpa family protein | GV829_08150 | P45108 | + | 1695193 - 1695738 | 18826.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.