Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | GV829_07610 | P30791 | - | 1598714 - 1599121 | 14840.5 |
| integration host factor subunit alpha | GV829_07615 | Q2N927 | - | 1599129 - 1599425 | 10776.0 |
| ketoacyl-acp synthase iii | GV829_07620 | A5VC86 | - | 1599673 - 1600638 | 33383.9 |
| phosphate acyltransferase plsx | GV829_07625 | Q1GT89 | - | 1600635 - 1601717 | 38088.8 |
| 50s ribosomal protein l32 | GV829_07630 | Q1GT88 | - | 1601762 - 1601941 | 6465.77 |
| mapeg family protein | GV829_07635 | Not Available | + | 1602262 - 1602693 | 15004.9 |
| mbl fold metallo-hydrolase | GV829_07640 | P75849 | - | 1602704 - 1603345 | 23226.8 |
| tigr02281 family clan aa aspartic protease | GV829_07645 | P29938 | - | 1603428 - 1603982 | 19446.3 |
| hypothetical protein | GV829_07650 | Not Available | - | 1604023 - 1605003 | 33810.7 |
| folate-binding protein ygfz | GV829_07655 | Q5T440 | - | 1605066 - 1605788 | 26429.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.