Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | GV829_07410 | O30646 | - | 1559574 - 1560506 | 32819.0 |
| low specificity l-threonine aldolase | GV829_07415 | O50584 | - | 1560509 - 1561516 | 35377.1 |
| argininosuccinate synthase | GV829_07420 | Q1GVV6 | - | 1561513 - 1562727 | 44962.5 |
| duf1801 domain-containing protein | GV829_07425 | Not Available | + | 1562860 - 1563309 | 16412.8 |
| acyl--coa ligase | GV829_07430 | Q0S4D9 | - | 1563306 - 1565012 | 60604.7 |
| prolipoprotein diacylglyceryl transferase | GV829_07435 | A5V5N0 | + | 1565053 - 1565955 | 33414.2 |
| class i sam-dependent methyltransferase | GV829_07440 | Q5BKM6 | + | 1566052 - 1567026 | 34437.2 |
| gnat family n-acetyltransferase | GV829_07445 | P9WQG4 | + | 1567029 - 1567562 | 19734.4 |
| peptidoglycan editing factor pgef | GV829_07450 | P45496 | + | 1567559 - 1568332 | 27140.1 |
| slc13/dass family transporter | GV829_07455 | Q49YW0 | + | 1568329 - 1569735 | 48144.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.