Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | GV829_07360 | Q9SD81 | + | 1550054 - 1551133 | 38982.3 |
| aldo/keto reductase | GV829_07365 | P77735 | + | 1551189 - 1552139 | 32652.0 |
| helix-turn-helix transcriptional regulator | GV829_07370 | Q57720 | - | 1552136 - 1552348 | 7854.41 |
| hypothetical protein | GV829_07375 | Not Available | - | 1552351 - 1552770 | 15362.1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | GV829_07380 | Q2G6P1 | + | 1552916 - 1553788 | 30525.9 |
| tetratricopeptide repeat protein | GV829_07385 | O52728 | + | 1553872 - 1554600 | 25578.4 |
| pqq-binding-like beta-propeller repeat protein | GV829_07390 | Q32D50 | + | 1554603 - 1555937 | 46486.1 |
| ribosome biogenesis gtpase der | GV829_07395 | Q2GA15 | + | 1555934 - 1557640 | 60956.2 |
| hpt domain-containing protein | GV829_07400 | Not Available | + | 1557819 - 1558223 | 15093.1 |
| duf418 domain-containing protein | GV829_07405 | P25747 | - | 1558246 - 1559511 | 46359.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.