Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s11 | GV829_07210 | Q1GVN5 | + | 1523716 - 1524105 | 13903.6 |
| dna-directed rna polymerase subunit alpha | GV829_07215 | Q1GVN6 | + | 1524232 - 1525290 | 38169.7 |
| 50s ribosomal protein l17 | GV829_07220 | A5V5X4 | + | 1525409 - 1525831 | 15478.7 |
| serine hydrolase | GV829_07225 | P07061 | + | 1525988 - 1527352 | 49308.9 |
| zinc ribbon domain-containing protein | GV829_07230 | Not Available | + | 1527413 - 1528402 | 33847.2 |
| marr family transcriptional regulator | GV829_07235 | Q58958 | + | 1528522 - 1529097 | 20993.6 |
| duf4166 domain-containing protein | GV829_07240 | Not Available | + | 1529151 - 1529849 | 26008.2 |
| saccharopine dehydrogenase | GV829_07245 | Not Available | + | 1529846 - 1530967 | 39836.8 |
| s9 family peptidase | GV829_07250 | Q06903 | + | 1531188 - 1533317 | 77865.8 |
| acyl--coa ligase | GV829_07255 | Q9EY88 | + | 1533395 - 1534954 | 56292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.