Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspj | GV829_07060 | Q00517 | - | 1493862 - 1494476 | 21194.4 |
| type ii secretion system minor pseudopilin gspi | GV829_07065 | Q00516 | - | 1494494 - 1494865 | 12888.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | GV829_07070 | P31735 | - | 1494862 - 1495347 | 16771.1 |
| type ii secretion system major pseudopilin gspg | GV829_07075 | Q00514 | - | 1495313 - 1495789 | 17192.7 |
| type ii secretion system inner membrane protein gspf | GV829_07080 | Q00513 | - | 1495793 - 1497007 | 43867.4 |
| type ii secretion system atpase gspe | GV829_07085 | P31741 | - | 1497011 - 1498489 | 52250.0 |
| type ii secretion system secretin gspd | GV829_07090 | P35818 | - | 1498504 - 1500726 | 77671.8 |
| pdz domain-containing protein | GV829_07095 | P45777 | - | 1500723 - 1501568 | 28528.3 |
| tonb-dependent receptor | GV829_07100 | Not Available | - | 1501758 - 1504445 | 97751.9 |
| hypothetical protein | GV829_07105 | Not Available | - | 1504532 - 1506115 | 53760.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.