Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase subunit purs | GV829_06960 | P12049 | - | 1468230 - 1468463 | 8217.97 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | GV829_06965 | Q1GVL7 | - | 1468467 - 1469246 | 29534.5 |
| crotonase/enoyl-coa hydratase family protein | GV829_06970 | Q589W8 | + | 1469463 - 1470362 | 32349.7 |
| class i sam-dependent methyltransferase | GV829_06975 | A0A1X9WEP1 | - | 1470567 - 1471283 | 26292.5 |
| peptide chain release factor 2 | GV829_06980 | Q2W3F8 | - | 1471376 - 1472503 | 41035.2 |
| penicillin-binding protein | GV829_06985 | Q9ZCE9 | - | 1472621 - 1475230 | 96074.4 |
| amin domain-containing protein | GV829_06990 | P26366 | - | 1475325 - 1476632 | 46736.7 |
| rne/rng family ribonuclease | GV829_06995 | P44443 | + | 1477230 - 1480022 | 102598.0 |
| m48 family metalloprotease | GV829_07000 | Q9KQ40 | + | 1480218 - 1481576 | 48628.8 |
| thioredoxin domain-containing protein | GV829_07005 | A1SHU2 | + | 1481647 - 1483419 | 60057.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.