Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | GV829_06460 | Q45223 | + | 1355657 - 1356526 | 30857.8 |
| epoxide hydrolase | GV829_06465 | Q06816 | + | 1356617 - 1357759 | 41935.5 |
| hypothetical protein | GV829_06470 | Not Available | - | 1357797 - 1358477 | 23966.3 |
| hypothetical protein | GV829_06475 | Not Available | - | 1358763 - 1359212 | 16180.5 |
| nupc/nupg family nucleoside cnt transporter | GV829_06480 | O32115 | - | 1359221 - 1360516 | 44625.9 |
| queuosine precursor transporter | GV829_06485 | P54163 | + | 1360684 - 1361340 | 23487.6 |
| acetylglutamate kinase | GV829_06490 | A5VAE6 | + | 1361337 - 1362236 | 31229.1 |
| yggt family protein | GV829_06495 | Q8U530 | + | 1362287 - 1362577 | 11000.3 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | GV829_06500 | Q1GNH1 | + | 1362574 - 1363476 | 31071.0 |
| hypothetical protein | GV829_06505 | Not Available | + | 1363533 - 1364213 | 25095.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.