Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | GV829_06210 | V5YMB3 | - | 1304159 - 1306096 | 69274.5 |
| rubredoxin | GV829_06215 | Q9AE63 | - | 1306176 - 1306355 | 6663.7 |
| cytochrome p450 | GV829_06220 | P33006 | - | 1306415 - 1307695 | 47591.5 |
| tetr/acrr family transcriptional regulator | GV829_06225 | Not Available | + | 1307822 - 1308532 | 25321.6 |
| nyn domain-containing protein | GV829_06230 | Q57905 | + | 1308603 - 1309220 | 23674.7 |
| ll-diaminopimelate aminotransferase | GV829_06235 | O87320 | + | 1309332 - 1310546 | 43895.5 |
| gamma-glutamylcyclotransferase | GV829_06240 | Not Available | + | 1310543 - 1310992 | 16258.9 |
| duf2721 domain-containing protein | GV829_06245 | Not Available | + | 1310992 - 1311465 | 17354.9 |
| calcium-binding protein | GV829_06250 | Not Available | - | 1311499 - 1312239 | 26901.4 |
| mfs transporter | GV829_06255 | A0QYL8 | + | 1312479 - 1313738 | 44494.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.