Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | + | 1290516 - 1293313 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 1293453 - 1293567 | Not Available |
| Trna-met | Not Available | Not Available | + | 1293683 - 1293759 | Not Available |
| nad(p)/fad-dependent oxidoreductase | GV829_06175 | Q47PU3 | - | 1293898 - 1295655 | 64285.8 |
| isovaleryl-coa dehydrogenase | GV829_06180 | Q9FS87 | + | 1295850 - 1297004 | 41196.4 |
| tigr00366 family protein | GV829_06185 | P46133 | + | 1297004 - 1298614 | 57176.7 |
| methylcrotonoyl-coa carboxylase | GV829_06190 | I6YDK7 | + | 1298611 - 1300236 | 58559.9 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | GV829_06195 | Q54KE6 | + | 1300242 - 1302110 | 66477.0 |
| maoc family dehydratase | GV829_06200 | Q3IZ78 | + | 1302119 - 1302571 | 16734.2 |
| cryptochrome/photolyase family protein | GV829_06205 | A9CH39 | - | 1302568 - 1304097 | 57945.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.