Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family protein | GV829_06010 | Q88FY5 | + | 1262873 - 1263556 | 25535.2 |
| polysaccharide deacetylase family protein | GV829_06015 | B5ZA76 | + | 1263553 - 1264434 | 33049.9 |
| polysaccharide deacetylase family protein | GV829_06020 | O13842 | + | 1264431 - 1265351 | 34118.3 |
| hypothetical protein | GV829_06025 | Not Available | - | 1265355 - 1266068 | 26663.7 |
| hypothetical protein | GV829_06030 | Not Available | + | 1266167 - 1266847 | 26157.6 |
| hypothetical protein | GV829_06035 | Not Available | - | 1266981 - 1267337 | 13648.5 |
| class i sam-dependent methyltransferase | GV829_06040 | Q8KZ94 | - | 1267334 - 1268542 | 44329.1 |
| fad-binding oxidoreductase | GV829_06045 | P32891 | - | 1268662 - 1270182 | 54080.8 |
| mfs transporter | GV829_06050 | A0LNN5 | - | 1270172 - 1271455 | 45024.1 |
| coa ester lyase | GV829_06055 | Q5I0K3 | + | 1271605 - 1272402 | 27655.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.