Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone oxidoreductase family protein | GV829_05660 | A7RK30 | - | 1188880 - 1189881 | 34474.5 |
| 3-isopropylmalate dehydratase small subunit | GV829_05665 | Q5NRC4 | - | 1190007 - 1190600 | 21293.2 |
| 3-isopropylmalate dehydratase large subunit | GV829_05670 | Q1GR84 | - | 1190600 - 1192027 | 50046.6 |
| beta-carotene hydroxylase | GV829_05675 | Q01332 | + | 1192156 - 1192668 | 18951.0 |
| voc family protein | GV829_05680 | Not Available | - | 1192741 - 1193127 | 13779.1 |
| glutathione s-transferase family protein | GV829_05685 | P57108 | - | 1193174 - 1193857 | 25195.1 |
| glutathione peroxidase | GV829_05690 | P06610 | - | 1193883 - 1194431 | 19311.9 |
| coa transferase subunit b | GV829_05695 | B0RVK3 | - | 1194544 - 1195179 | 22457.2 |
| hypothetical protein | GV829_05700 | Not Available | - | 1195200 - 1196237 | 35887.3 |
| coa transferase subunit a | GV829_05705 | B0RVK4 | - | 1196237 - 1196944 | 25379.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.