Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4345 family protein | GV829_05510 | Not Available | - | 1154317 - 1154730 | 14497.1 |
| glutamate dehydrogenase | GV829_05515 | E1V4J5 | - | 1154837 - 1159489 | 166921.0 |
| hypothetical protein | GV829_05520 | Not Available | - | 1159702 - 1161129 | 51301.1 |
| aminotransferase class v-fold plp-dependent enzyme | GV829_05525 | P18549 | - | 1161225 - 1162400 | 42150.9 |
| tryptophan 2,3-dioxygenase | GV829_05530 | Q9A4E8 | - | 1162397 - 1163194 | 29436.1 |
| hypothetical protein | GV829_05535 | Not Available | - | 1163229 - 1163489 | 9759.35 |
| hypothetical protein | GV829_05540 | Not Available | + | 1163565 - 1163765 | 7125.49 |
| nad(p)/fad-dependent oxidoreductase | GV829_05545 | Q8N2H3 | + | 1163851 - 1165431 | 56357.4 |
| cytochrome c family protein | GV829_05550 | P00078 | + | 1165665 - 1166129 | 16003.8 |
| sdr family nad(p)-dependent oxidoreductase | GV829_05555 | P37440 | + | 1166164 - 1166964 | 27621.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.