Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | GV829_05210 | Not Available | - | 1105634 - 1107226 | 58785.1 |
| hypothetical protein | GV829_05215 | Not Available | + | 1107242 - 1107577 | 12123.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | GV829_05220 | B0UJH5 | - | 1107825 - 1108664 | 29532.4 |
| pyrimidine 5'-nucleotidase | GV829_05225 | Q09893 | - | 1108699 - 1109385 | 25685.4 |
| s8 family serine peptidase | GV829_05230 | P00780 | + | 1109517 - 1111928 | 82653.0 |
| alpha/beta hydrolase fold domain-containing protein | GV829_05235 | P9WK84 | + | 1112060 - 1112950 | 32014.6 |
| 30s ribosomal protein s12 | GV829_05240 | Q1GP94 | + | 1113221 - 1113592 | 13880.1 |
| 30s ribosomal protein s7 | GV829_05245 | Q1GP95 | + | 1113617 - 1114087 | 17695.3 |
| elongation factor g | GV829_05250 | Q1GP96 | + | 1114222 - 1116315 | 76957.6 |
| elongation factor tu | GV829_05255 | Q1GP97 | + | 1116405 - 1117595 | 43023.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.