Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter atp-binding protein | GV829_05060 | P33982 | - | 1079612 - 1080403 | 28157.1 |
| osta family protein | GV829_05065 | P25893 | - | 1080560 - 1081147 | 19879.5 |
| lps export abc transporter periplasmic protein lptc | GV829_05070 | Not Available | - | 1081171 - 1081809 | 23075.9 |
| ribonuclease d | GV829_05075 | Q0BVP4 | - | 1081823 - 1082440 | 22871.3 |
| cold shock domain-containing protein | GV829_05080 | P55390 | + | 1082686 - 1083501 | 27920.2 |
| hypothetical protein | GV829_05085 | Not Available | - | 1083635 - 1084564 | 32065.4 |
| cisplatin damage response atp-dependent dna ligase | GV829_05090 | Q1II25 | - | 1084718 - 1086331 | 59138.4 |
| tmem165/gdt1 family protein | GV829_05095 | A0A0H3AJF5 | - | 1086380 - 1086949 | 20110.1 |
| hypothetical protein | GV829_05100 | Not Available | - | 1087191 - 1087754 | 18541.8 |
| hypothetical protein | GV829_05105 | Not Available | - | 1087791 - 1088114 | 11428.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.