Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lacunae |
| Strain | CSW-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lacunae CSW-10
Accession NumberCP053015.1
Gene Summary
Adenine Count
568800 bp
Thymine Count
563352 bp
Guanine Count
927009 bp
Cytosine Count
918673 bp
Genome Length
2977834 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | GV829_04860 | O31484 | - | 1040836 - 1041132 | 11143.3 |
| transcription termination factor rho | GV829_04865 | P52156 | - | 1041172 - 1042428 | 46468.0 |
| copd family protein | GV829_04870 | O26018 | - | 1042616 - 1043056 | 16627.1 |
| uroporphyrinogen decarboxylase | GV829_04875 | A5VA70 | - | 1043075 - 1044145 | 38725.8 |
| kinase/pyrophosphorylase | GV829_04880 | Q1GP75 | + | 1044310 - 1045284 | 35855.7 |
| septum formation protein maf | GV829_04885 | Q2GC58 | + | 1045281 - 1045880 | 21149.6 |
| shikimate dehydrogenase | GV829_04890 | Q1GP77 | + | 1045877 - 1046728 | 29642.7 |
| dephospho-coa kinase | GV829_04895 | Q2GC60 | + | 1046725 - 1047354 | 22292.8 |
| dna polymerase iii subunit epsilon | GV829_04900 | Q1RJM1 | + | 1047367 - 1048071 | 25698.9 |
| ribosome-associated translation inhibitor raia | GV829_04905 | P30334 | + | 1048166 - 1048759 | 21446.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.