Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Bruguierivoracaceae
Genus
Sodalis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Bruguierivoracaceae |
| Genus | Sodalis |
| Species | Sodalis ligni |
| Strain | dw23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sodalis ligni dw23
Accession NumberCP075169.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5726 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ivb secretion system protein icmh/dotu | GTU79_01605 | P39064 | + | 347964 - 349088 | 41297.3 |
| type vi secretion system membrane subunit tssm | GTU79_01610 | Q9I755 | + | 349092 - 352658 | 135177.0 |
| type vi secretion system protein tssa | GTU79_01615 | Q9I750 | + | 352655 - 353656 | 36655.3 |
| type vi secretion system contractile sheath large subunit | GTU79_01620 | Q9I748 | + | 354276 - 355862 | 58838.8 |
| type vi secretion system tube protein hcp | GTU79_01625 | Q9I747 | + | 355865 - 356374 | 18365.8 |
| type vi secretion system baseplate subunit tssg | GTU79_01630 | Not Available | - | 356411 - 357532 | 42565.5 |
| type vi secretion system baseplate subunit tssf | GTU79_01635 | Q9I744 | - | 357529 - 359364 | 68316.1 |
| type vi secretion system baseplate subunit tsse | GTU79_01640 | Q9I745 | - | 359368 - 359913 | 20350.5 |
| duf3540 domain-containing protein | GTU79_01645 | Not Available | - | 359939 - 360571 | 23190.8 |
| pentapeptide repeat-containing protein | GTU79_01650 | Not Available | - | 360614 - 361675 | 40200.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
