Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Bruguierivoracaceae
Genus
Sodalis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Bruguierivoracaceae |
| Genus | Sodalis |
| Species | Sodalis ligni |
| Strain | dw23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sodalis ligni dw23
Accession NumberCP075169.1
Gene Summary
Adenine Count
1451300 bp
Thymine Count
1450926 bp
Guanine Count
1770436 bp
Cytosine Count
1771029 bp
Genome Length
6443694 bp
Protein-coding Genes
5726 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | GTU79_25765 | P36948 | + | 5505999 - 5506913 | 31782.2 |
| abc transporter substrate-binding protein | GTU79_25770 | P44737 | + | 5506985 - 5507938 | 33743.7 |
| l-fucose isomerase | GTU79_25775 | A8AP13 | + | 5508028 - 5509827 | 65690.8 |
| l-fuculokinase | GTU79_25780 | P11553 | + | 5510086 - 5511555 | 52897.5 |
| l-fucose mutarotase | GTU79_25785 | B5F4S5 | + | 5511549 - 5511977 | 15212.8 |
| l-fucose operon activator | GTU79_25790 | P0ACK8 | + | 5512046 - 5512795 | 28186.1 |
| glycoside-pentoside-hexuronide (gph):cation symporter | GTU79_25795 | P31435 | + | 5512981 - 5514333 | 48791.9 |
| alpha-xylosidase | GTU79_25800 | P31434 | + | 5514400 - 5516727 | 87677.9 |
| sugar phosphate isomerase/epimerase | GTU79_25805 | A7ZAH3 | - | 5516802 - 5517635 | 31480.8 |
| 3-ketoacyl-acp reductase | GTU79_25810 | Q5HGK2 | - | 5517719 - 5518507 | 28190.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
