Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Bruguierivoracaceae
Genus
Sodalis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Bruguierivoracaceae |
| Genus | Sodalis |
| Species | Sodalis ligni |
| Strain | dw23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sodalis ligni dw23
Accession NumberCP075169.1
Gene Summary
Adenine Count
1451300 bp
Thymine Count
1450926 bp
Guanine Count
1770436 bp
Cytosine Count
1771029 bp
Genome Length
6443694 bp
Protein-coding Genes
5726 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GTU79_25615 | Not Available | - | 5471359 - 5471775 | 14998.7 |
| darobactin export abc transporter atp-binding protein | GTU79_25620 | Q58903 | - | 5472334 - 5472993 | 24139.5 |
| darobactin export abc transporter periplasmic adaptor subunit | GTU79_25625 | Not Available | - | 5472995 - 5474251 | 47448.4 |
| darobactin export abc transporter permease subunit | GTU79_25630 | Not Available | - | 5474242 - 5476626 | 89332.5 |
| hypothetical protein | GTU79_25635 | P0AGI6 | - | 5477000 - 5478163 | 41319.5 |
| xylose abc transporter atp-binding protein | GTU79_25640 | Q6DB03 | - | 5478141 - 5479685 | 56147.6 |
| d-xylose abc transporter substrate-binding protein | GTU79_25645 | P37387 | - | 5480041 - 5481036 | 35485.8 |
| xylose isomerase | GTU79_25650 | A1JT10 | + | 5481527 - 5482846 | 49216.1 |
| xylulokinase | GTU79_25655 | P09099 | + | 5483141 - 5484598 | 52720.8 |
| helix-turn-helix domain-containing protein | GTU79_25660 | Q9KMA5 | - | 5484748 - 5485032 | 10391.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
