Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Bruguierivoracaceae
Genus
Sodalis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Bruguierivoracaceae |
| Genus | Sodalis |
| Species | Sodalis ligni |
| Strain | dw23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sodalis ligni dw23
Accession NumberCP075169.1
Gene Summary
Adenine Count
1451300 bp
Thymine Count
1450926 bp
Guanine Count
1770436 bp
Cytosine Count
1771029 bp
Genome Length
6443694 bp
Protein-coding Genes
5726 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spi-1 type iii secretion system chaperone spak | GTU79_25465 | P0A1N1 | - | 5428842 - 5429243 | 15244.0 |
| hypothetical protein | GTU79_25470 | P0A1I4 | - | 5429264 - 5431317 | 75689.6 |
| type iii secretion system gatekeeper subunit sctw | GTU79_25475 | Q56052 | - | 5431365 - 5432471 | 41701.3 |
| type iii secretion system outer membrane ring subunit sctc | GTU79_25480 | P35672 | - | 5432462 - 5434198 | 63455.5 |
| helix-turn-helix domain-containing protein | GTU79_25485 | P69342 | - | 5434195 - 5435004 | 31083.5 |
| transglycosylase slt domain-containing protein | GTU79_25490 | E1WAC2 | - | 5435229 - 5435723 | 18500.2 |
| winged helix-turn-helix domain-containing protein | GTU79_25495 | P43015 | - | 5435733 - 5437289 | 57497.0 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | GTU79_25500 | Q6D2B2 | + | 5438521 - 5439804 | 45886.1 |
| efflux rnd transporter permease subunit | GTU79_25505 | B7LV39 | + | 5439801 - 5443016 | 115439.0 |
| efflux rnd transporter permease subunit | GTU79_25510 | A6TBH5 | + | 5443016 - 5446120 | 111147.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
