Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudopuniceibacterium antarcticum HQ09
Accession NumberCP045201.1
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | F3W81_03460 | Q5LRN5 | - | 738054 - 739193 | 39836.7 |
| trna dihydrouridine synthase dusb | F3W81_03465 | Q08111 | + | 739380 - 740390 | 35488.8 |
| pas domain-containing protein | F3W81_03470 | P09431 | + | 740387 - 741523 | 41195.4 |
| response regulator | F3W81_03475 | P09432 | + | 741523 - 742896 | 50860.7 |
| hamp domain-containing protein | F3W81_03480 | Q04850 | + | 742996 - 745272 | 83748.1 |
| response regulator | F3W81_03485 | Q04849 | + | 745280 - 746707 | 52900.7 |
| tigr02281 family clan aa aspartic protease | F3W81_03490 | Q9ZC99 | - | 746734 - 747315 | 20713.1 |
| naat family transporter | F3W81_03495 | O32244 | - | 747391 - 748008 | 21635.4 |
| atp-binding cassette domain-containing protein | F3W81_03500 | A0A0H2VBH0 | - | 748073 - 749932 | 68444.4 |
| nucleoside-diphosphate kinase | F3W81_03505 | A8LIX8 | + | 750371 - 750793 | 14889.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.