Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudopuniceibacterium antarcticum HQ09
Accession NumberCP045201.1
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | F3W81_04160 | Q9DBT9 | - | 884247 - 886655 | 88474.2 |
| duf2254 domain-containing protein | F3W81_04165 | P9WM35 | + | 887012 - 888211 | 44310.3 |
| duf21 domain-containing protein | F3W81_04170 | P37908 | - | 888247 - 889587 | 48564.9 |
| tyrosine recombinase | F3W81_04175 | Q9A437 | - | 889765 - 890706 | 34847.7 |
| hypothetical protein | F3W81_04180 | Not Available | - | 890713 - 892410 | 59764.6 |
| shikimate kinase | F3W81_04185 | Q5LSY0 | + | 892687 - 893232 | 20108.3 |
| 3-dehydroquinate synthase | F3W81_04190 | Q1GGQ1 | + | 893229 - 894353 | 39796.4 |
| acryloyl-coa reductase | F3W81_04195 | Q5LS56 | + | 894533 - 895525 | 34420.5 |
| universal stress protein | F3W81_04200 | P67092 | + | 895544 - 895957 | 14385.4 |
| deoxyribodipyrimidine photo-lyase | F3W81_04205 | A9CJC9 | + | 896095 - 897510 | 52698.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.