Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudopuniceibacterium antarcticum HQ09
Accession NumberCP045201.1
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | F3W81_03710 | Q9ZFU7 | - | 793204 - 794238 | 37442.5 |
| tim barrel protein | F3W81_03715 | Q9I6P6 | - | 794355 - 796238 | 68593.7 |
| trap transporter large permease subunit | F3W81_03720 | Q9KR66 | - | 796244 - 797539 | 46058.5 |
| trap transporter small permease subunit | F3W81_03725 | Not Available | - | 797532 - 798053 | 19814.6 |
| c4-dicarboxylate abc transporter | F3W81_03730 | Q16BC9 | - | 798120 - 799094 | 35655.4 |
| shikimate dehydrogenase | F3W81_03735 | Q8FSF0 | - | 799115 - 799993 | 30746.6 |
| tetr family transcriptional regulator | F3W81_03740 | Q88FX7 | + | 800147 - 800809 | 24608.4 |
| alpha/beta hydrolase fold domain-containing protein | F3W81_03745 | P71668 | + | 800806 - 801750 | 33971.2 |
| duf3237 family protein | F3W81_03750 | Q97DZ9 | + | 801747 - 802211 | 16763.2 |
| glycosyltransferase | F3W81_03755 | A7TZT2 | - | 802245 - 803294 | 37463.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.