Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudopuniceibacterium antarcticum HQ09
Accession NumberCP045201.1
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | F3W81_02860 | Q1GHK9 | + | 606431 - 606889 | 16277.7 |
| peptidoglycan-binding protein | F3W81_02865 | Not Available | + | 606975 - 607589 | 22778.0 |
| carboxylesterase | F3W81_02870 | Not Available | + | 607580 - 608122 | 19813.7 |
| heme lyase ccmf/nrfe family subunit | F3W81_02875 | Q00500 | + | 608220 - 610181 | 70313.7 |
| cytochrome c biogenesis protein ccda | F3W81_02880 | Q00501 | + | 610178 - 610636 | 16681.3 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | F3W81_02885 | P24162 | + | 610710 - 611486 | 27936.3 |
| citrate (si)-synthase | F3W81_02890 | O33915 | - | 611631 - 612926 | 48338.8 |
| glutamate--trna ligase | F3W81_02895 | Q5LRH2 | - | 613005 - 614411 | 51735.6 |
| duf4131 domain-containing protein | F3W81_02900 | P39695 | + | 614559 - 616679 | 75174.1 |
| transcriptional repressor lexa | F3W81_02905 | Q5LRH4 | - | 616673 - 617377 | 25347.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.